tomato sour soup metagenome

The data comes from FoodMicrobionet and does not cover yogurts with probiotics added. Most foods have not been studied. Weight indicate the relative amount of the total bacteria. Bacteria not found in the NCBI list may be omitted. See the above site for a full list.

Data is aggregate from multiple studies which often use different measurement techniques

Bacteria RankWeight
[Clostridium] innocuum species 0.0808
Acidibacter genus 0.307
Acidovorax genus 0.0331
Acinetobacter genus 1.12
Acinetobacter guillouiae species 0.0808
Acinetobacter johnsonii species 0.202
Acinetobacter schindleri species 0.0425
Actinobacillus succinogenes species 0.168
Adhaeribacter genus 0.16
Aeromonas genus 0.0492
Ahniella genus 0.0164
Alistipes genus 0.28
Alistipes shahii species 0.132
Alkanindiges genus 0.0504
Alloprevotella genus 0.391
Aquabacterium genus 0.082
Aquicella genus 0.0328
Arcicella rosea species 0.0861
Arenimonas genus 0.049
Bacillaceae family 0.0596
Bacillus genus 0.785
Bacillus safensis species 0.0533
Bacillus subtilis species 0.0199
Bacteroides genus 5.32
Bacteroides acidifaciens species 0.574
Bacteroides faecichinchillae species 0.0553
Bacteroides intestinalis species 0.196
Bacteroides stercoris species 0.0697
Bacteroides thetaiotaomicron species 2.31
Bacteroides uniformis species 0.14
Bdellovibrio genus 0.0492
Bifidobacterium pseudolongum species 0.23
Burkholderiales order 0.0861
Butyricimonas genus 0.259
Calditrichaceae family 0.0392
Candidatus Babeliales order 0.0574
Cellvibrio genus 0.0984
Chitinophaga genus 0.0652
Chitinophagaceae family 0.398
Chitinophagales order 0.168
Chryseobacterium genus 0.111
Chryseolinea genus 0.0246
Chthoniobacter genus 0.111
Citrobacter genus 0.696
Cohnella genus 0.0492
Comamonadaceae family 0.0294
Comamonas genus 0.0638
Coprobacillus cateniformis species 0.051
Crenothrix genus 0.0369
Cytobacillus kochii species 0.0556
Delftia genus 0.0278
Desulfovibrionaceae family 0.0383
Dyadobacter genus 0.0656
Enhydrobacter aerosaccus species 0.0689
Enterobacter genus 0.22
Enterobacterales order 0.0383
Enterobacteriaceae family 0.283
Enterococcus genus 0.831
Enterococcus faecium species 0.0451
Erwinia genus 0.017
Erysipelotrichaceae family 0.0468
Faecalibaculum rodentium species 0.0553
Ferribacterium genus 0.0451
Ferruginibacter genus 0.43
Flavobacterium genus 0.234
Flavobacterium succinicans species 0.0616
Flectobacillus genus 0.0331
Gaiella genus 0.338
Gaiellales order 1.25
Gammaproteobacteria class 0.0369
Gemmatimonadaceae family 0.108
Geobacillus genus 0.0205
Geobacter genus 0.0492
Georgfuchsia genus 0.0287
Geothermobacter genus 0.0839
Granulicatella genus 0.123
Haemophilus genus 0.0328
Haliangium genus 0.248
Halomonas genus 0.404
Haloplasma genus 0.0451
Holdemanella genus 0.0369
Klebsiella genus 0.308
Klebsiella pneumoniae species 0.0597
Kluyvera genus 0.0224
Kurthia genus 0.068
Lacticaseibacillus genus 0.0533
Lactiplantibacillus genus 0.502
Lactobacillaceae family 0.028
Lactobacillus genus 63.7
Lactobacillus acetotolerans species 0.101
Lactobacillus crispatus species 0.0533
Lactobacillus gasseri species 0.0617
Lactobacillus intestinalis species 0.051
Lactococcus genus 0.153
Lactococcus garvieae species 0.0369
Latilactobacillus genus 0.041
Legionella genus 0.0451
Lelliottia genus 0.0595
Levilactobacillus genus 0.0582
Ligilactobacillus genus 1.84
Limosilactobacillus genus 0.068
Lysobacter genus 0.0738
Lysobacter niabensis species 0.131
Macrococcus genus 0.0818
Massilia genus 0.176
Methylacidiphilaceae family 0.0246
Methylibium genus 0.0205
Methylonatrum genus 0.0738
Microscillaceae family 0.041
Mucilaginibacter genus 0.0615
Muribaculaceae family 4.56
Muribaculum intestinale species 0.183
Mycobacterium genus 0.0499
Myxococcaceae family 0.0451
Neochlamydia genus 0.0246
Nitrospira genus 0.19
Nocardioides genus 0.0634
Nocardiopsaceae family 0.0425
Nocardiopsis genus 0.118
Noviherbaspirillum genus 0.0283
Oceanobacillus genus 0.403
Oceanobacillus oncorhynchi species 0.017
Oceanobacillus picturae species 0.0615
Oceanobacillus profundus species 0.0246
Odoribacter genus 0.051
Paenibacillaceae family 0.0504
Paenibacillus genus 0.148
Paenibacillus alginolyticus species 0.238
Paenibacillus lautus species 0.0369
Paenibacillus pectinilyticus species 0.307
Paludibacteraceae family 0.0451
Pantoea genus 0.055
Pantoea agglomerans species 0.0246
Parabacteroides genus 0.993
Parabacteroides merdae species 0.122
Parasegetibacter genus 0.041
Parasutterella genus 0.408
Parasutterella excrementihominis species 0.374
Pediococcus genus 0.214
Peredibacter genus 0.0697
Phascolarctobacterium faecium species 0.0369
Phocaeicola vulgatus species 1.87
Planctomycetota phylum 0.0369
Polyangiaceae family 0.123
Porphyromonas genus 0.0383
Prevotellaceae family 0.0861
Pseudomonas genus 0.423
Ralstonia genus 0.345
Raoultella genus 0.0545
Rhizobacter genus 0.1
Rosenbergiella genus 0.0448
Rubrivivax genus 0.0451
Sandaracinaceae family 0.0672
Saprospiraceae family 0.126
Sediminibacterium salmoneum species 0.101
Solirubrobacter genus 0.107
Solirubrobacteraceae family 0.102
Solitalea genus 0.123
Sphingobacteriaceae family 0.0205
Sphingobacterium lactis species 0.017
Sporolactobacillus genus 0.131
Staphylococcus genus 0.226
Stenotrophomonas genus 0.116
Stenotrophomonas maltophilia species 0.0565
Steroidobacteraceae family 0.0415
Sutterella genus 0.0383
Sutterellaceae family 0.119
Tannerellaceae family 0.88
Tepidimonas genus 0.0224
Terrimonas genus 0.1
Thomasclavelia ramosa species 0.417
Trabulsiella genus 0.0656
Tumebacillus genus 0.152
Undibacterium genus 0.0492
Variovorax genus 0.0492
Veillonella genus 0.0425
Vicinamibacteraceae family 0.332
Vicinamibacterales order 0.738
Virgibacillus genus 0.17
Weissella genus 0.0949
Xylophilus genus 0.0328

BOOM

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